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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84835.1KEGG: dia:Dtpsy_1848 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR. (211 aa)    
Predicted Functional Partners:
AEB84665.1
KEGG: vap:Vapar_5148 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
 
  
 0.787
AEB84836.1
KEGG: axy:AXYL_01256 3-hydroxy-3-methylglutaryl-CoA lyase 1; PFAM: Pyruvate carboxyltransferase.
     
 0.763
AEB86593.1
KEGG: axy:AXYL_03119 GntR family regulatory protein 35; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
  
     0.761
AEB84837.1
KEGG: axy:AXYL_01255 extra-cytoplasmic solute receptor family protein 24.
       0.756
AEB85232.1
GntR domain protein; KEGG: ctt:CtCNB1_0240 GntR-like protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
 
  
 0.754
AEB86996.1
KEGG: dia:Dtpsy_3457 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
 
  
 0.676
AEB84838.1
KEGG: axy:AXYL_01254 CoA-transferase family III family protein 9; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.649
AEB84834.1
KEGG: dia:Dtpsy_1847 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
       0.497
AEB84839.1
KEGG: rpt:Rpal_2644 transcriptional regulator, XRE family; PFAM: Protein of unknown function DUF2083,transcriptional regulator; Helix-turn-helix type 3; Protein of unknown function DUF955; SMART: Helix-turn-helix type 3.
     
 0.451
AEB84840.1
TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: dia:Dtpsy_1849 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding.
       0.420
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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