Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AEB84866.1PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_2324 methyltransferase type 11. (201 aa)    
Predicted Functional Partners:
AEB84867.1
PFAM: DTW; KEGG: dia:Dtpsy_1758 DTW domain containing protein.
     
 0.769
AEB85897.1
KEGG: dia:Dtpsy_2451 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp.
 
   
 0.734
AEB84769.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB.
  
    0.725
AEB82486.1
PFAM: Outer membrane efflux protein; KEGG: xtr:100485479 hypothetical protein LOC100485479.
  
     0.716
AEB84868.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.712
AEB82676.1
PFAM: O-antigen ligase-related; KEGG: ajs:Ajs_0184 O-antigen polymerase.
  
     0.666
AEB83180.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type.
  
     0.656
AEB85898.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_2452 porin gram-negative type.
  
     0.636
AEB85948.1
KEGG: dia:Dtpsy_2505 hypothetical protein.
  
     0.607
AEB86787.1
Lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; KEGG: ajs:Ajs_3937 lipase.
  
     0.598
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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