STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84878.1KEGG: bbr:BB1197 hypothetical protein. (351 aa)    
Predicted Functional Partners:
AEB84877.1
Butyryl-CoA dehydrogenase; KEGG: xtr:100487140 short-chain specific acyl-CoA dehydrogenase, mitochondrial-like; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
       0.727
AEB84879.1
Formyl-CoA transferase; KEGG: cti:RALTA_B0352 putative acyl-CoA transferases/carnitine dehydratase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.723
AEB84875.1
NADPH:quinone reductase; KEGG: bbr:BB4304 putative zinc-binding dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like.
       0.501
AEB84876.1
Formyl-CoA transferase; KEGG: bbr:BB4303 putative racemase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.501
AEB84880.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bbr:BB4302 TetR family transcriptional regulator.
       0.447
AEB84873.1
PFAM: Crotonase, core; KEGG: bbr:BB4306 putative enoyl-CoA hydratase/isomerase family protein.
       0.426
AEB84874.1
KEGG: xtr:100486988 UPF0065 protein in tcbD-tcbE intergenic region-like.
       0.426
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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