STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84909.1PFAM: Acyltransferase 3; KEGG: dia:Dtpsy_2295 acyltransferase 3. (385 aa)    
Predicted Functional Partners:
AEB83156.1
PFAM: Domain of unknown function DUF1854; KEGG: dia:Dtpsy_0638 hypothetical protein.
 
     0.757
AEB83155.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: dia:Dtpsy_0637 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
     0.708
AEB85369.1
KEGG: ajs:Ajs_1826 hypothetical protein.
  
   
 0.656
AEB83454.1
Hypothetical protein; Manually curated; KEGG: dia:Dtpsy_2796 hypothetical protein.
  
     0.632
AEB84910.1
PFAM: 2-nitropropane dioxygenase, NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD.
       0.598
AEB83153.1
TIGRFAM: Cyanophycin synthetase; KEGG: dia:Dtpsy_0635 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Mur ligase, C-terminal.
 
  
 0.593
AEB82486.1
PFAM: Outer membrane efflux protein; KEGG: xtr:100485479 hypothetical protein LOC100485479.
  
     0.586
AEB83495.1
KEGG: rfr:Rfer_0701 hypothetical protein.
 
     0.564
AEB83138.1
KEGG: rfr:Rfer_0705 tetratricopeptide TPR_2; TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein, putative; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; Tetratricopeptide TPR-1.
 
   
 0.562
AEB83108.1
TIGRFAM: Conserved hypothetical protein CHP03016, PEP-CTERM; KEGG: rfr:Rfer_0661 hypothetical protein.
 
     0.559
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.