Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84922.1PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: lch:Lcho_0406 tripartite ATP-independent periplasmic transporter DctQ. (166 aa)    
Predicted Functional Partners:
AEB85249.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ctt:CtCNB1_4596 tripartite ATP-independent periplasmic.
  
  
  0.933
AEB84921.1
KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
 
 
 0.919
AEB84896.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dia:Dtpsy_1743 tripartite ATP-independent periplasmic transporter DctQ component.
  
  
  0.916
AEB83063.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ajs:Ajs_0606 tripartite ATP-independent periplasmic transporter DctQ.
  
  
  0.911
AEB85360.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dia:Dtpsy_1875 tripartite ATP-independent periplasmic transporter DctQ component.
  
  
 
0.910
AEB86092.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ctt:CtCNB1_3517 tripartite ATP-independent periplasmic protein.
     
  0.900
AEB84919.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: lch:Lcho_4275 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain.
 
     0.891
AEB84920.1
Transketolase; KEGG: dac:Daci_0728 transketolase domain-containing protein; PFAM: Transketolase, N-terminal.
 
     0.879
AEB84923.1
KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
 
  
 0.843
AEB84924.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: lch:Lcho_0404 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR.
 
     0.725
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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