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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84931.1PFAM: Protein of unknown function DUF2242; KEGG: dia:Dtpsy_2310 putative lipoprotein. (270 aa)    
Predicted Functional Partners:
AEB84930.1
Hypothetical protein; KEGG: dia:Dtpsy_2309 putative transporter signal peptide protein.
       0.688
AEB83690.1
PFAM: Mechanosensitive ion channel MscS; KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein.
  
     0.670
AEB83238.1
KEGG: dia:Dtpsy_0721 sulfate transporter/antisigma-factor antagonist STAS.
  
     0.549
AEB84562.1
KEGG: dia:Dtpsy_2195 hypothetical protein.
  
     0.543
AEB85104.1
KEGG: ajs:Ajs_1464 hypothetical protein.
  
     0.543
AEB82774.1
VanZ family protein; PFAM: VanZ-like; KEGG: ajs:Ajs_0269 VanZ family protein.
  
     0.534
AEB86913.1
KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane.
  
     0.523
AEB83843.1
PFAM: Protein of unknown function DUF3348; KEGG: vap:Vapar_3241 hypothetical protein.
  
     0.506
AEB84932.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2312 protein of unknown function DUF214.
       0.506
AEB84933.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2313 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.506
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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