STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84938.1KEGG: dia:Dtpsy_2324 calcium-binding EF-hand-containing protein. (213 aa)    
Predicted Functional Partners:
AEB83690.1
PFAM: Mechanosensitive ion channel MscS; KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein.
 
     0.665
AEB84658.1
PFAM: Phospholipase/carboxylesterase; KEGG: vei:Veis_2297 phospholipase/carboxylesterase.
  
     0.614
AEB83180.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type.
  
     0.565
AEB84937.1
KEGG: dia:Dtpsy_2323 putative signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
       0.550
AEB85948.1
KEGG: dia:Dtpsy_2505 hypothetical protein.
  
     0.512
AEB84866.1
PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_2324 methyltransferase type 11.
  
     0.511
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.508
AEB83019.1
Transport-associated protein; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; PFAM: Transport-associated; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
 
     0.423
AEB84650.1
PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: dac:Daci_2483 hypothetical protein.
  
     0.410
AEB84931.1
PFAM: Protein of unknown function DUF2242; KEGG: dia:Dtpsy_2310 putative lipoprotein.
 
     0.403
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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