Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84951.1NnrS family protein; PFAM: NnrS; KEGG: ajs:Ajs_2847 NnrS family protein. (403 aa)    
Predicted Functional Partners:
AEB84952.1
PFAM: Protein of unknown function DUF2249; KEGG: dia:Dtpsy_2337 hypothetical protein.
     
 0.646
AEB82557.1
KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit.
 
  
 0.591
AEB83720.1
PFAM: Peptidase U32; KEGG: ajs:Ajs_3221 peptidase U32.
 
    0.566
AEB83771.1
Nitrous oxide expression regulator, NosR; KEGG: dia:Dtpsy_1059 FMN-binding domain protein; PFAM: FMN-binding; SMART: FMN-binding.
 
    0.540
AEB84950.1
KEGG: dia:Dtpsy_2335 HI0933 family protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like.
  
    0.518
AEB83772.1
KEGG: ajs:Ajs_1139 nitrous-oxide reductase; PFAM: Cytochrome c oxidase subunit II C-terminal.
 
  
 0.476
AEB83719.1
PFAM: SCP2 sterol-binding domain; KEGG: ajs:Ajs_3222 hypothetical protein.
 
    0.462
AEB83721.1
PFAM: Peptidase U32; KEGG: ajs:Ajs_3220 peptidase U32.
 
    0.457
AEB83621.1
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
  
 0.432
AEB83622.1
KEGG: dia:Dtpsy_2510 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2.
 
  
 0.430
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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