STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84954.1KEGG: dia:Dtpsy_2339 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal. (154 aa)    
Predicted Functional Partners:
AEB84955.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.996
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
 0.982
AEB84957.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2342 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core.
 
  
 0.974
AEB84956.1
SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: ajs:Ajs_2852 SufBD protein.
 
  
 0.959
hscB
Co-chaperone Hsc20; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.
  
 
 0.958
AEB84953.1
KEGG: dia:Dtpsy_2338 FeS assembly SUF system protein SufT; TIGRFAM: FeS assembly SUF system protein SufT, putative; PFAM: Domain of unknown function DUF59.
 
    0.944
AEB84958.1
FeS assembly protein SufB; KEGG: dia:Dtpsy_2343 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD.
 
  
 0.928
cyaY
Protein cyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
    
 0.921
AEB84766.1
KEGG: dia:Dtpsy_1643 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: Ferredoxin, 2Fe-2S type; PFAM: Ferredoxin.
  
 0.894
AEB84763.1
KEGG: dia:Dtpsy_1640 iron-sulfur cluster assembly protein IscA; TIGRFAM: ISC system FeS cluster assembly, IscA scaffold; FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family.
  
  
 0.817
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.