Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84973.1Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: vei:Veis_4468 ABC transporter related; SMART: ATPase, AAA+ type, core. (260 aa)    
Predicted Functional Partners:
AEB84972.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: vei:Veis_4469 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.927
AEB84971.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: vei:Veis_4470 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.926
AEB84974.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: vei:Veis_4467 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
0.892
AEB84975.1
PFAM: Extracellular ligand-binding receptor; KEGG: bcm:Bcenmc03_6241 extracellular ligand-binding receptor.
 
  
 0.857
AEB84970.1
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_4471 extracellular ligand-binding receptor.
 
  
 0.832
AEB82644.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: ajs:Ajs_0155 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.783
AEB86579.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: rfr:Rfer_4064 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.595
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
    0.590
AEB85426.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: axy:AXYL_02567 inner-membrane translocator 29; Belongs to the binding-protein-dependent transport system permease family.
  
 0.583
AEB83873.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: bbr:BB0600 putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.576
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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