STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85005.1PFAM: Protein of unknown function DUF2478; KEGG: bpt:Bpet1276 hypothetical protein. (179 aa)    
Predicted Functional Partners:
AEB85004.1
ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: ctt:CtCNB1_0597 periplasmic binding protein.
 
     0.879
AEB85006.1
PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: ctt:CtCNB1_0594 TonB-dependent receptor.
 
     0.731
AEB85000.1
PFAM: Protein of unknown function DUF364; KEGG: mta:Moth_1420 hypothetical protein.
 
     0.723
AEB85002.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dac:Daci_4650 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
     0.706
AEB84997.1
modD protein; TIGRFAM: Putative molybdenum utilization protein ModD; KEGG: cli:Clim_0375 ModD protein; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; Belongs to the NadC/ModD family.
 
     0.673
AEB84996.1
Transcriptional regulator, ModE family; KEGG: gpb:HDN1F_09840 molybdopterin-binding protein; TIGRFAM: Molybdenum-binding protein, N-terminal; Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR.
 
     0.664
AEB85001.1
PFAM: Methyltransferase type 11; KEGG: bpt:Bpet1277 hypothetical protein.
 
     0.644
AEB85003.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: dac:Daci_4649 transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.627
AEB84999.1
TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; KEGG: dac:Daci_3883 molybdenum ABC transporter periplasmic molybdate-binding protein.
  
    0.613
AEB84998.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.604
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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