Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB85006.1PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: ctt:CtCNB1_0594 TonB-dependent receptor. (659 aa)    
Predicted Functional Partners:
AEB85004.1
ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: ctt:CtCNB1_0597 periplasmic binding protein.
 
   
 0.887
AEB85002.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dac:Daci_4650 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
   
 0.813
AEB85003.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: dac:Daci_4649 transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.765
AEB84996.1
Transcriptional regulator, ModE family; KEGG: gpb:HDN1F_09840 molybdopterin-binding protein; TIGRFAM: Molybdenum-binding protein, N-terminal; Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR.
 
     0.732
AEB85005.1
PFAM: Protein of unknown function DUF2478; KEGG: bpt:Bpet1276 hypothetical protein.
 
     0.722
AEB85184.1
KEGG: dia:Dtpsy_1442 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
 
 
 
 0.603
AEB85001.1
PFAM: Methyltransferase type 11; KEGG: bpt:Bpet1277 hypothetical protein.
 
     0.576
AEB82894.1
KEGG: ajs:Ajs_0447 hypothetical protein.
   
 
 0.571
AEB83128.1
KEGG: hse:Hsero_2760 hypothetical protein.
   
 
 0.571
AEB84158.1
PFAM: NHL repeat; KEGG: phe:Phep_1359 NHL repeat containing protein.
   
 
 0.571
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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