Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB85052.1KEGG: rpf:Rpic12D_4970 ATP-dependent OLD family endonuclease. (674 aa)    
Predicted Functional Partners:
AEB85051.1
PFAM: DNA helicase, UvrD/REP type; KEGG: rpf:Rpic12D_4971 DNA helicase II.
 
   
 0.953
AEB83948.1
Hypothetical protein; Manually curated; KEGG: bxe:Bxe_A1801 hypothetical protein.
 
   
 0.781
AEB85053.1
PFAM: Histone-like bacterial DNA-binding protein; KEGG: pol:Bpro_1551 histone-like DNA-binding protein.
       0.773
AEB86292.1
Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: aav:Aave_3575 sporulation domain-containing protein.
  
     0.481
AEB85054.1
PFAM: Transposase IS3/IS911family; KEGG: ajs:Ajs_1457 transposase IS3/IS911 family protein.
  
  
 0.413
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.