STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85100.1KEGG: lbf:LBF_0421 hypothetical protein. (83 aa)    
Predicted Functional Partners:
AEB85099.1
SMART: TRASH; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: lbf:LBF_0420 cation transport ATPase; PFAM: ATPase, P-type, ATPase-associated domain; YHS; Haloacid dehalogenase-like hydrolase.
 
     0.841
AEB85102.1
PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: ajs:Ajs_1466 isoprenylcysteine carboxyl methyltransferase.
 
    0.831
AEB85098.1
KEGG: ajs:Ajs_1470 hypothetical protein.
 
     0.803
AEB85104.1
KEGG: ajs:Ajs_1464 hypothetical protein.
 
     0.800
AEB84564.1
KEGG: dia:Dtpsy_2193 isoprenylcysteine carboxyl methyltransferase.
 
    0.685
AEB84562.1
KEGG: dia:Dtpsy_2195 hypothetical protein.
 
     0.655
AEB84559.1
KEGG: bmj:BMULJ_00902 copper resistance protein B; manually curated; PFAM: Copper resistance B precursor.
 
   
 0.576
AEB85101.1
KEGG: ajs:Ajs_1467 heavy metal transport/detoxification protein; manually curated; PFAM: Heavy metal transport/detoxification protein.
       0.565
AEB84556.1
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
     0.513
AEB85097.1
TIGRFAM: YVTN beta-propeller repeat; KEGG: ajs:Ajs_1471 YVTN beta-propeller repeat-containing protein.
       0.505
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.