Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEB85105.1KEGG: ajs:Ajs_1463 hypothetical protein. (114 aa)    
Predicted Functional Partners:
AEB85060.1
PFAM: Outer membrane efflux protein; KEGG: ajs:Ajs_2670 putative copper resistance-related lipoprotein.
 
 
 0.848
AEB85059.1
PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: ajs:Ajs_2669 multicopper oxidase, type 3.
 
   
 0.791
AEB85058.1
PFAM: Blue (type 1) copper domain; KEGG: ajs:Ajs_2668 blue (type1) copper domain-containing protein.
 
     0.773
AEB85811.1
PFAM: Blue (type 1) copper domain; KEGG: ajs:Ajs_2601 blue (type1) copper domain-containing protein.
 
     0.771
AEB84560.1
PFAM: Blue (type 1) copper domain; KEGG: net:Neut_0023 blue (type1) copper domain-containing protein.
 
     0.769
AEB85091.1
KEGG: ajs:Ajs_2703 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.577
AEB85171.1
KEGG: dia:Dtpsy_1455 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR.
   
  
 0.576
AEB85104.1
KEGG: ajs:Ajs_1464 hypothetical protein.
       0.556
AEB85722.1
KEGG: dia:Dtpsy_2183 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.516
AEB85103.1
Protein of unknown function DUF2933; KEGG: ajs:Ajs_1465 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2933.
       0.508
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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