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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85118.1KEGG: ajs:Ajs_1598 nucleoid protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS. (109 aa)    
Predicted Functional Partners:
AEB83427.1
KEGG: dac:Daci_1840 putative lipoprotein.
  
    0.541
AEB83672.1
PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA.
  
     0.530
AEB85183.1
KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein; manually curated; PFAM: BFD-like [2Fe-2S]-binding domain.
  
     0.505
AEB87006.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.500
AEB85119.1
Hypothetical protein.
       0.496
AEB82893.1
PFAM: Protein of unknown function DUF3567; KEGG: ajs:Ajs_0446 hypothetical protein.
  
     0.474
AEB86916.1
PFAM: Branched-chain amino acid transport, AzlD; KEGG: dia:Dtpsy_3400 branched-chain amino acid transport.
  
     0.446
AEB83238.1
KEGG: dia:Dtpsy_0721 sulfate transporter/antisigma-factor antagonist STAS.
  
     0.434
AEB86160.1
KEGG: dia:Dtpsy_2944 histone protein.
  
     0.413
AEB82641.1
PFAM: Rickettsia 17kDa surface antigen; KEGG: ajs:Ajs_0152 17 kDa surface antigen.
  
    0.409
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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