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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85182.1KEGG: dia:Dtpsy_1444 SWIB/MDM2 domain protein; PFAM: SWIB/MDM2 domain; SMART: SWIB domain. (93 aa)    
Predicted Functional Partners:
AEB85183.1
KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein; manually curated; PFAM: BFD-like [2Fe-2S]-binding domain.
       0.536
AEB84177.1
Manually curated; PFAM: SNF2-related; Helicase, C-terminal; KEGG: tbd:Tbd_0933 DEAD/DEAH box helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.
  
 
 0.499
AEB85181.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_2402 hypothetical protein.
       0.490
AEB86843.1
KEGG: dia:Dtpsy_3340 nuclear protein SET; PFAM: SET domain; SMART: SET domain; Post-SET domain.
 
 
 
 0.486
AEB84915.1
PFAM: Histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein.
   
 0.468
AEB83358.1
PFAM: Outer membrane lipoprotein LolB; KEGG: dia:Dtpsy_0826 putative lipoprotein.
  
     0.426
AEB84147.1
SMART: DEAD-like helicase, N-terminal; KEGG: tmz:Tmz1t_0972 DEAD-like helicase.
    
 0.403
AEB84283.1
SMART: DEAD-like helicase, N-terminal; KEGG: rpf:Rpic12D_0667 DEAD-like helicase.
    
 0.403
AEB85397.1
Hypothetical protein; Manually curated; KEGG: ecc:c5378 hypothetical protein.
    
 0.403
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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