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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85189.1Protein of unknown function UPF0005; PFAM: Inhibitor of apoptosis-promoting Bax1-related; KEGG: dia:Dtpsy_1437 protein of unknown function UPF0005; Belongs to the BI1 family. (229 aa)    
Predicted Functional Partners:
AEB85188.1
PFAM: Domain of unknown function DUF336; KEGG: dia:Dtpsy_1438 protein of unknown function DUF336.
 
     0.601
AEB83328.1
KEGG: dia:Dtpsy_0797 import inner membrane translocase subunit Tim44; PFAM: Membrane transporter, Tim44-related/Ribosomal protein L45; SMART: Membrane transporter, Tim44-related/Ribosomal protein L45.
 
  
 0.514
AEB85998.1
KEGG: dia:Dtpsy_2695 STE24 endopeptidase; PFAM: Peptidase M48.
 
  
 0.509
AEB85190.1
Regulatory protein MarR; KEGG: rme:Rmet_3623 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
       0.504
AEB85191.1
PFAM: Major facilitator superfamily MFS-1; KEGG: reu:Reut_B5563 major facilitator transporter.
       0.504
AEB85192.1
KEGG: ajs:Ajs_2412 hypothetical protein.
       0.483
AEB83237.1
PFAM: Toluene tolerance Ttg2; KEGG: dia:Dtpsy_0720 toluene tolerance family protein.
  
     0.473
AEB85504.1
PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_1744 methyltransferase type 11.
 
     0.460
AEB85595.1
TIGRFAM: Methionine sulphoxide reductase B; KEGG: dia:Dtpsy_2028 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
  
   0.458
AEB84431.1
PFAM: Peptidase M48; KEGG: mfa:Mfla_1159 peptidase M48, Ste24p.
  
  
 0.451
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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