STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB85189.1Protein of unknown function UPF0005; PFAM: Inhibitor of apoptosis-promoting Bax1-related; KEGG: dia:Dtpsy_1437 protein of unknown function UPF0005; Belongs to the BI1 family. (229 aa)    
Predicted Functional Partners:
AEB85188.1
PFAM: Domain of unknown function DUF336; KEGG: dia:Dtpsy_1438 protein of unknown function DUF336.
 
     0.595
AEB83328.1
KEGG: dia:Dtpsy_0797 import inner membrane translocase subunit Tim44; PFAM: Membrane transporter, Tim44-related/Ribosomal protein L45; SMART: Membrane transporter, Tim44-related/Ribosomal protein L45.
 
  
 0.559
AEB85191.1
PFAM: Major facilitator superfamily MFS-1; KEGG: reu:Reut_B5563 major facilitator transporter.
     
 0.510
AEB85190.1
Regulatory protein MarR; KEGG: rme:Rmet_3623 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
       0.504
AEB85504.1
PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_1744 methyltransferase type 11.
 
    0.488
AEB85998.1
KEGG: dia:Dtpsy_2695 STE24 endopeptidase; PFAM: Peptidase M48.
 
  
 0.487
AEB83237.1
PFAM: Toluene tolerance Ttg2; KEGG: dia:Dtpsy_0720 toluene tolerance family protein.
  
     0.473
AEB83818.1
HflK protein; HflC and HflK could encode or regulate a protease.
 
  
 0.467
AEB84431.1
PFAM: Peptidase M48; KEGG: mfa:Mfla_1159 peptidase M48, Ste24p.
  
  
 0.463
htpX
PFAM: Peptidase M48; KEGG: ajs:Ajs_3742 heat shock protein HtpX; Belongs to the peptidase M48B family.
  
  
 0.463
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.