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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85194.1PFAM: Chromate transporter; KEGG: dia:Dtpsy_1615 chromate transporter. (196 aa)    
Predicted Functional Partners:
AEB85195.1
PFAM: Chromate transporter; KEGG: dia:Dtpsy_1614 chromate transporter.
 
     0.957
AEB85570.1
KEGG: ajs:Ajs_2035 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter.
  
     0.743
AEB83995.1
KEGG: bav:BAV1573 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter.
  
     0.722
AEB85193.1
PFAM: Small multidrug resistance protein; KEGG: dia:Dtpsy_1617 small multidrug resistance protein.
       0.500
AEB84148.1
PFAM: Chromate resistance exported protein; KEGG: har:HEAR0891 putative chromate resistance protein.
 
   
 0.433
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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