Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB85212.1PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ajs:Ajs_2275 sulphate transporter. (561 aa)    
Predicted Functional Partners:
AEB86616.1
KEGG: ajs:Ajs_3890 protein tyrosine/serine phosphatase.
   
 
 0.758
AEB85213.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_1598 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
       0.708
AEB85214.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dia:Dtpsy_1597 cobyrinic acid ac-diamide synthase.
       0.696
AEB84570.1
KEGG: maq:Maqu_0130 hypothetical protein.
    
 
 0.693
AEB85533.1
PFAM: Ankyrin repeat; KEGG: dia:Dtpsy_1983 ankyrin.
    
 
 0.693
AEB82989.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: dia:Dtpsy_0522 metallophosphoesterase.
  
   0.661
AEB85659.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: ajs:Ajs_1567 metallophosphoesterase.
  
   0.661
AEB86223.1
KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding.
   
 
 0.639
AEB83133.1
KEGG: rfr:Rfer_0698 hypothetical protein.
    
 
 0.603
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.603
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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