STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85221.1KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain. (388 aa)    
Predicted Functional Partners:
AEB85219.1
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]; PFAM: Aldehyde dehydrogenase domain.
 
 0.822
AEB83053.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: dac:Daci_1339 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
 0.753
AEB83561.1
3-hydroxybutyryl-CoA epimerase; KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase.
  
 0.753
AEB85587.1
3-hydroxybutyryl-CoA epimerase; KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.753
AEB86435.1
3-hydroxybutyryl-CoA epimerase; KEGG: dac:Daci_1393 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.753
AEB86645.1
3-hydroxybutyryl-CoA epimerase; Manually curated; KEGG: xtr:100493475 peroxisomal bifunctional enzyme-like; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.753
AEB85223.1
TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: dia:Dtpsy_1809 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; Belongs to the HIBADH-related family.
 
  
 0.740
AEB85220.1
PFAM: Protein of unknown function DUF1311; KEGG: ajs:Ajs_2008 hypothetical protein.
       0.689
AEB84516.1
KEGG: ajs:Ajs_2556 3-hydroxyisobutyryl-CoA hydrolase; PFAM: Crotonase, core.
 
 0.602
AEB85222.1
TfoX domain-containing protein; PFAM: TfoX, N-terminal; KEGG: dia:Dtpsy_1810 hypothetical protein.
  
    0.597
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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