STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85231.1Glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: ctt:CtCNB1_0239 mandelate racemase/muconate lactonizing; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal. (431 aa)    
Predicted Functional Partners:
AEB85229.1
SMART: SAF domain; TIGRFAM: Galactarate dehydratase; KEGG: ajs:Ajs_1998 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain.
 
 
 0.985
AEB85234.1
PFAM: Dihydrodipicolinate synthetase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; HAMAP: 5-dehydro-4-deoxyglucarate dehydratase; KEGG: dia:Dtpsy_1793 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.972
AEB85237.1
Glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: dia:Dtpsy_1790 glucarate dehydratase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal.
 
  
 
0.935
AEB83732.1
KEGG: bpd:BURPS668_A2080 putative piperideine-6-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
    
 0.904
AEB83930.1
KEGG: bur:Bcep18194_C7305 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde dehydrogenase domain.
    
 0.904
AEB85487.1
PFAM: Aldehyde dehydrogenase domain; KEGG: dia:Dtpsy_1966 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.904
AEB85230.1
KEGG: ajs:Ajs_1997 hypothetical protein.
       0.711
AEB82935.1
TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: dia:Dtpsy_0475 2-dehydro-3-deoxyglucarate aldolase; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.705
AEB85232.1
GntR domain protein; KEGG: ctt:CtCNB1_0240 GntR-like protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
 
   
 0.672
AEB82533.1
Galactonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: mes:Meso_4537 galactonate dehydratase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal.
  
   
 0.669
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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