node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEB85253.1 | AEB85254.1 | Alide2_2905 | Alide2_2906 | KEGG: vap:Vapar_5216 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal. | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | 0.707 |
AEB85254.1 | AEB85253.1 | Alide2_2906 | Alide2_2905 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | KEGG: vap:Vapar_5216 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal. | 0.707 |
AEB85254.1 | mnmE | Alide2_2906 | Alide2_4730 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.691 |
AEB85254.1 | rplC | Alide2_2906 | Alide2_0356 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.695 |
AEB85254.1 | rplK | Alide2_2906 | Alide2_0405 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.695 |
AEB85254.1 | rplM | Alide2_2906 | Alide2_0663 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.691 |
AEB85254.1 | rplO | Alide2_2906 | Alide2_4358 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.693 |
AEB85254.1 | rplU | Alide2_2906 | Alide2_0889 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.732 |
AEB85254.1 | rplX | Alide2_2906 | Alide2_4366 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.727 |
AEB85254.1 | rsfS | Alide2_2906 | Alide2_2341 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.715 |
AEB85254.1 | trmB | Alide2_2906 | Alide2_2897 | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.712 |
mnmE | AEB85254.1 | Alide2_4730 | Alide2_2906 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | 0.691 |
mnmE | rplC | Alide2_4730 | Alide2_0356 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.793 |
mnmE | rplK | Alide2_4730 | Alide2_0405 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.800 |
mnmE | rplM | Alide2_4730 | Alide2_0663 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.860 |
mnmE | rplO | Alide2_4730 | Alide2_4358 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.863 |
mnmE | rplU | Alide2_4730 | Alide2_0889 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.848 |
mnmE | rplX | Alide2_4730 | Alide2_4366 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.798 |
mnmE | rsfS | Alide2_4730 | Alide2_2341 | tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.806 |
rplC | AEB85254.1 | Alide2_0356 | Alide2_2906 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase. | 0.695 |