STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85261.15-dehydro-2-deoxygluconokinase; KEGG: dac:Daci_0985 ribokinase-like domain-containing protein; PFAM: Protein of unknown function DUF2090; Carbohydrate/purine kinase. (651 aa)    
Predicted Functional Partners:
AEB85260.1
PFAM: KduI/IolB isomerase; KEGG: rsc:RCFBP_20182 myo-inositol catabolism protein, protein IolB.
 
 
 0.999
AEB85262.1
Transcriptional regulator, RpiR family; PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: dac:Daci_0986 RpiR family transcriptional regulator.
 
   
 0.916
hisA
TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; KEGG: ajs:Ajs_0765 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis.
  
  
 0.764
AEB86649.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: azc:AZC_1416 sugar ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
  
 0.751
AEB86652.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: azc:AZC_1419 ABC transporter sugar-binding protein.
 
  
 0.737
AEB86650.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: reu:Reut_B4134 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.687
AEB86651.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: reu:Reut_B4135 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.681
AEB86994.1
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: dia:Dtpsy_3456 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain.
 
 
 0.644
AEB85219.1
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]; PFAM: Aldehyde dehydrogenase domain.
 
 
 0.591
AEB83222.1
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: xtr:100496453 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like; PFAM: Aldehyde dehydrogenase domain.
 
 
 0.590
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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