Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB85272.1KEGG: dia:Dtpsy_1587 protein of unknown function DUF323; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor. (431 aa)    
Predicted Functional Partners:
AEB85273.1
Methyltransferase; KEGG: dia:Dtpsy_1586 methyltransferase; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260.
  
 0.994
AEB86588.1
PFAM: Sulfatase; KEGG: axy:AXYL_03117 arylsulfatase.
  
   0.749
AEB86754.1
PFAM: Glutamine amidotransferase, class-II; KEGG: ajs:Ajs_0335 glutamine amidotransferase, class-II.
  
  
 0.470
AEB85274.1
KEGG: dia:Dtpsy_1585 OmpW family protein; manually curated; PFAM: Outer membrane protein, OmpW.
       0.431
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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