STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85300.1KEGG: dia:Dtpsy_1541 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase. (491 aa)    
Predicted Functional Partners:
AEB85301.1
PFAM: BioY protein; KEGG: dia:Dtpsy_1540 BioY protein.
 
    0.900
AEB85299.1
TIGRFAM: Thiolase; KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.852
AEB85302.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; KEGG: ajs:Ajs_2320 cobalt transport protein.
 
  
 0.815
AEB85422.1
KEGG: tfu:Tfu_1300 DitJ-like CoA ligase; PFAM: AMP-dependent synthetase/ligase.
  
     0.772
AEB86368.1
o-succinylbenzoate--CoA ligase; KEGG: bpt:Bpet0794 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase.
  
     0.769
AEB84319.1
KEGG: bxe:Bxe_C1205 putative superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; SMART: Rhodanese-like.
  
 
 0.758
AEB85303.1
KEGG: dia:Dtpsy_1538 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
     0.696
AEB86648.1
KEGG: psa:PST_1119 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase.
  
     0.683
AEB85298.1
TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; KEGG: dia:Dtpsy_1546 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal.
   
   0.646
AEB84062.1
KEGG: rpi:Rpic_2630 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
  
     0.587
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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