STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85333.1PFAM: NAD-dependent epimerase/dehydratase; Domain of unknown function DUF1731, C-terminal; KEGG: bav:BAV2083 hypothetical protein. (300 aa)    
Predicted Functional Partners:
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
  
 0.784
AEB85334.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ctt:CtCNB1_1994 hypothetical protein.
 
  
 0.754
AEB85338.1
Lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
     0.718
AEB85335.1
PFAM: Deoxyribodipyrimidine photolyase-related protein; KEGG: ctt:CtCNB1_1993 deoxyribodipyrimidine photolyase-related protein.
       0.655
AEB85952.1
PFAM: Zinc/iron permease; KEGG: dia:Dtpsy_2667 zinc/iron permease.
  
    0.626
AEB83358.1
PFAM: Outer membrane lipoprotein LolB; KEGG: dia:Dtpsy_0826 putative lipoprotein.
  
    0.575
AEB86891.1
YaeQ family protein; PFAM: YaeQ; KEGG: dia:Dtpsy_3377 YaeQ family protein.
   
    0.553
AEB83676.1
KEGG: dia:Dtpsy_2622 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; Belongs to the peptidase S26 family.
   
    0.442
hutI
TIGRFAM: Imidazolonepropionase; KEGG: pol:Bpro_1035 imidazolonepropionase; PFAM: Amidohydrolase 1.
  
    0.436
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.416
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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