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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85340.1PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: bav:BAV2082 dehydrogenase. (434 aa)    
Predicted Functional Partners:
AEB85342.1
KEGG: dia:Dtpsy_2396 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase.
  
 0.995
AEB85341.1
PFAM: Protein of unknown function DUF1365; KEGG: bav:BAV2081 hypothetical protein.
 
  
 0.971
AEB85066.1
KEGG: ajs:Ajs_2676 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase.
  
 0.957
AEB85345.1
KEGG: dia:Dtpsy_2392 putative lipoprotein.
 
   
 0.916
AEB85346.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bav:BAV2076 short-chain dehydrogenase.
 
   
 0.914
AEB85344.1
PFAM: Major facilitator superfamily MFS-1; KEGG: bav:BAV2078 transporter.
 
   
 0.902
AEB85347.1
Isomerase; KEGG: bav:BAV2075 isomerase.
 
   
 0.888
AEB82912.1
KEGG: ajs:Ajs_0460 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase.
  
 0.873
AEB86276.1
PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dia:Dtpsy_2857 cytochrome c oxidase assembly protein.
 
      0.867
AEB85343.1
KEGG: dia:Dtpsy_2394 hypothetical protein.
 
     0.811
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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