STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85352.1KEGG: mpt:Mpe_A2996 putative transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (271 aa)    
Predicted Functional Partners:
AEB85351.1
KEGG: bvi:Bcep1808_2622 integrase catalytic subunit.
 
  
 0.903
AEB83731.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.631
AEB85350.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dia:Dtpsy_3510 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.600
AEB86181.1
KEGG: bvi:Bcep1808_2622 integrase catalytic subunit.
 
  
 0.589
AEB85349.1
KEGG: ajs:Ajs_1801 deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
       0.573
AEB84259.1
PFAM: Integrase, catalytic core; KEGG: axy:AXYL_06593 integrase family protein 10.
  
 0.566
AEB83093.1
PFAM: Integrase, catalytic core; KEGG: axy:AXYL_06593 integrase family protein 10.
  
 0.558
AEB83294.1
PFAM: Integrase, catalytic core; KEGG: axy:AXYL_06593 integrase family protein 10.
  
 0.558
AEB84526.1
PFAM: Integrase, catalytic core; KEGG: axy:AXYL_06593 integrase family protein 10.
  
 0.558
AEB84576.1
PFAM: Integrase, catalytic core; KEGG: axy:AXYL_06593 integrase family protein 10.
  
 0.558
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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