STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85387.1PFAM: Protein of unknown function DUF465; KEGG: cvi:CV_3311 hypothetical protein. (74 aa)    
Predicted Functional Partners:
AEB85085.1
Polyphosphate kinase 2; KEGG: ajs:Ajs_2697 hypothetical protein; TIGRFAM: Polyphosphate kinase 2, PA0141; PFAM: Polyphosphate kinase-2-related.
 
    0.804
AEB85703.1
Polyphosphate kinase 2; KEGG: ajs:Ajs_1514 hypothetical protein; TIGRFAM: Polyphosphate kinase 2, PA0141; PFAM: Polyphosphate kinase-2-related.
 
    0.802
AEB83529.1
TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG.
   
    0.738
AEB84696.1
TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG.
   
    0.738
AEB83533.1
TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: dia:Dtpsy_1008 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.635
AEB83527.1
KEGG: dia:Dtpsy_1002 Cbb3-type cytochrome oxidase component.
  
    0.591
AEB85388.1
KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central.
 
     0.578
AEB84757.1
UPF0313 protein ygiQ; HAMAP: Uncharacterised protein family UPF0313; PFAM: Radical SAM N-terminal; Radical SAM; KEGG: dia:Dtpsy_1631 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
   
    0.538
AEB82697.1
KEGG: lch:Lcho_3364 putative sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Activator of aromatic catabolism; Helix-turn-helix, Fis-type; 4-vinyl reductase, 4VR; SMART: ATPase, AAA+ type, core.
   
  
 0.475
AEB83622.1
KEGG: dia:Dtpsy_2510 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2.
   
    0.462
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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