Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB85391.1KEGG: dia:Dtpsy_2253 hypothetical protein. (143 aa)    
Predicted Functional Partners:
AEB85392.1
KEGG: dia:Dtpsy_2254 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein.
 
 
 0.907
cobS
Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.825
AEB85016.1
KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein.
  
     0.701
AEB83426.1
PFAM: Protein of unknown function DUF3460; KEGG: ajs:Ajs_3491 hypothetical protein.
  
     0.677
AEB85390.1
Lysine decarboxylase; KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal.
 
     0.662
AEB83221.1
KEGG: dia:Dtpsy_0707 hypothetical protein.
 
    0.642
AEB85599.1
PFAM: Protein of unknown function DUF1049; KEGG: dia:Dtpsy_1389 hypothetical protein.
  
     0.633
AEB84501.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic.
  
    0.626
AEB86160.1
KEGG: dia:Dtpsy_2944 histone protein.
  
     0.588
AEB83818.1
HflK protein; HflC and HflK could encode or regulate a protease.
 
 
 0.579
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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