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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85391.1KEGG: dia:Dtpsy_2253 hypothetical protein. (143 aa)    
Predicted Functional Partners:
AEB85392.1
KEGG: dia:Dtpsy_2254 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein.
 
  
 0.882
cobS
Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
    0.768
AEB85016.1
KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein.
  
     0.701
AEB85390.1
Lysine decarboxylase; KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal.
 
     0.682
AEB83426.1
PFAM: Protein of unknown function DUF3460; KEGG: ajs:Ajs_3491 hypothetical protein.
  
     0.677
AEB83221.1
KEGG: dia:Dtpsy_0707 hypothetical protein.
 
    0.633
AEB85599.1
PFAM: Protein of unknown function DUF1049; KEGG: dia:Dtpsy_1389 hypothetical protein.
  
     0.633
AEB84501.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic.
  
    0.620
AEB86160.1
KEGG: dia:Dtpsy_2944 histone protein.
  
     0.588
AEB83262.1
KEGG: dia:Dtpsy_0741 putative transmembrane protein.
  
     0.577
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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