STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85412.1KEGG: abn:AB57_0651 hypothetical protein. (179 aa)    
Predicted Functional Partners:
AEB85411.1
Hypothetical protein.
       0.768
AEB85413.1
Helix-turn-helix domain protein; Manually curated; PFAM: Helix-turn-helix type 3; KEGG: rsl:RPSI07_1481 putative HTH-type transcriptional regulator; SMART: Helix-turn-helix type 3.
       0.521
AEB86988.1
KEGG: dia:Dtpsy_3448 putative transmembrane protein.
  
  
 0.514
AEB82817.1
PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_0315 hypothetical protein.
  
  
 0.428
AEB85081.1
PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_2693 hypothetical protein.
  
  
 0.428
AEB85707.1
PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_1510 hypothetical protein.
  
  
 0.428
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.