| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEB82442.1 | AEB84441.1 | Alide2_0002 | Alide2_2067 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | 0.922 |
| AEB82442.1 | AEB85388.1 | Alide2_0002 | Alide2_3041 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central. | 0.967 |
| AEB82442.1 | AEB85415.1 | Alide2_0002 | Alide2_3069 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. | 0.974 |
| AEB82442.1 | AEB85536.1 | Alide2_0002 | Alide2_3195 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase. | 0.998 |
| AEB82442.1 | dinB | Alide2_0002 | Alide2_1246 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.922 |
| AEB82442.1 | mutS | Alide2_0002 | Alide2_1390 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.973 |
| AEB82442.1 | polA | Alide2_0002 | Alide2_3637 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.987 |
| AEB82442.1 | recA | Alide2_0002 | Alide2_4568 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.888 |
| AEB82442.1 | rnhB | Alide2_0002 | Alide2_3456 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.908 |
| AEB83253.1 | AEB85415.1 | Alide2_0840 | Alide2_3069 | KEGG: ajs:Ajs_0769 putative transmembrane protein. | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. | 0.607 |
| AEB84441.1 | AEB82442.1 | Alide2_2067 | Alide2_0002 | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.922 |
| AEB84441.1 | AEB85388.1 | Alide2_2067 | Alide2_3041 | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central. | 0.469 |
| AEB84441.1 | AEB85415.1 | Alide2_2067 | Alide2_3069 | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. | 0.906 |
| AEB84441.1 | AEB85536.1 | Alide2_2067 | Alide2_3195 | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase. | 0.636 |
| AEB84441.1 | polA | Alide2_2067 | Alide2_3637 | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.735 |
| AEB84441.1 | recA | Alide2_2067 | Alide2_4568 | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.797 |
| AEB85388.1 | AEB82442.1 | Alide2_3041 | Alide2_0002 | KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.967 |
| AEB85388.1 | AEB84441.1 | Alide2_3041 | Alide2_2067 | KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central. | KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like. | 0.469 |
| AEB85388.1 | AEB85415.1 | Alide2_3041 | Alide2_3069 | KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central. | KEGG: vap:Vapar_6015 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. | 0.835 |
| AEB85388.1 | AEB85536.1 | Alide2_3041 | Alide2_3195 | KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: DNA ligase, ATP-dependent, central. | KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase. | 0.823 |
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