STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85416.1Transposase; KEGG: ppg:PputGB1_4754 transposase. (220 aa)    
Predicted Functional Partners:
AEB85407.1
TIGRFAM: Conserved hypothetical protein CHP03299, phage/plasmid-related; KEGG: ctt:CtCNB1_1504 hypothetical protein.
  
    0.670
AEB85417.1
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: ppg:PputGB1_4755 phage transcriptional regulator, AlpA.
 
  
 0.640
AEB86833.1
PFAM: DTW; KEGG: ajs:Ajs_3970 DTW domain-containing protein.
  
     0.498
AEB85409.1
KEGG: pag:PLES_23531 hypothetical protein.
  
     0.491
AEB85408.1
Phage-type endonuclease; KEGG: har:HEAR0514 hypothetical protein; TIGRFAM: Putative phage-type endonuclease; PFAM: YqaJ viral recombinase family.
  
     0.466
AEB84572.1
KEGG: axy:AXYL_01137 heavy metal RND efflux outer membrane protein, CzcC family.
  
     0.429
AEB85775.1
KEGG: gca:Galf_1463 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.414
AEB85044.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: ppu:PP_2501 phage integrase, putative; Belongs to the 'phage' integrase family.
  
    0.404
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.