STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85429.1KEGG: rpb:RPB_4328 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (269 aa)    
Predicted Functional Partners:
AEB85430.1
Propanoyl-CoA C-acyltransferase; KEGG: bxe:Bxe_B2740 lipid-transfer protein; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.822
AEB85428.1
PFAM: Extracellular ligand-binding receptor; KEGG: axy:AXYL_02569 ABC branched chain amino acid family transporter, periplasmic ligand binding protein.
   
 
 0.695
AEB83906.1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase; KEGG: bpa:BPP0606 putative enoyl-CoA hydratase; PFAM: MaoC-like dehydratase.
 
 0.667
AEB85431.1
KEGG: azl:AZL_a10790 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase.
  
 
 0.652
AEB84230.1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase; KEGG: pol:Bpro_5282 MaoC-like dehydratase; PFAM: MaoC-like dehydratase.
 
 0.622
AEB86223.1
KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding.
  
 
 0.613
AEB85425.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: axy:AXYL_02566 ABC transporter family protein 38; SMART: ATPase, AAA+ type, core.
 
     0.566
AEB85421.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ctt:CtCNB1_1711 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR.
 
    
0.536
AEB85424.1
KEGG: axy:AXYL_02565 ABC transporter family protein 37; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.509
AEB85426.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: axy:AXYL_02567 inner-membrane translocator 29; Belongs to the binding-protein-dependent transport system permease family.
       0.509
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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