STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
AEB85444.1Ferredoxin, C-terminal protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)    
Predicted Functional Partners:
AEB85445.1
Ferredoxin--NADP(+) reductase; KEGG: dia:Dtpsy_1933 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.820
AEB83226.1
TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: dia:Dtpsy_0710 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region.
   
 
 0.761
AEB83453.1
Formate dehydrogenase, alpha subunit; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: Formate dehydrogenase, alpha subunit; KEGG: dia:Dtpsy_2797 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Ferredoxin; 4Fe-4S binding domain; Molydopterin dinucleotide-binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.755
AEB85446.1
PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: ctt:CtCNB1_2972 cytosine/purines/uracil permease.
       0.746
AEB85442.1
KEGG: aav:Aave_3055 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase.
     
 0.658
AEB83452.1
KEGG: dia:Dtpsy_2798 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
 
 0.621
AEB85440.1
PFAM: Uncharacterised conserved protein UCP030820; KEGG: dia:Dtpsy_1928 hypothetical protein.
 
     0.602
AEB85443.1
TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: dia:Dtpsy_1931 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding.
       0.580
AEB86333.1
TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: dia:Dtpsy_0876 NADH-quinone oxidoreductase, E subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit.
   
 
 0.568
AEB85439.1
PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: dia:Dtpsy_1927 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
   
 0.542
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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