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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85454.1KEGG: dia:Dtpsy_1941 3-hydroxy-acyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal. (506 aa)    
Predicted Functional Partners:
AEB84064.1
PFAM: Crotonase, core; KEGG: rpi:Rpic_2628 enoyl-CoA hydratase/isomerase.
 0.979
AEB83932.1
PFAM: Crotonase, core; KEGG: bbr:BB0629 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.954
AEB84873.1
PFAM: Crotonase, core; KEGG: bbr:BB4306 putative enoyl-CoA hydratase/isomerase family protein.
 0.946
AEB82472.1
PFAM: Crotonase, core; KEGG: rme:Rmet_0841 enoyl-CoA hydratase.
 
 0.944
AEB82520.1
TIGRFAM: Acetoacetyl-CoA synthase; KEGG: dia:Dtpsy_0074 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase.
  
 
 0.932
AEB84108.1
acetoacetyl-CoA reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; TIGRFAM: Acetoacetyl-CoA reductase; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase; PFAM: Short-chain dehydrogenase/reductase SDR.
  
 0.917
AEB84816.1
TIGRFAM: Acetoacetyl-CoA reductase; KEGG: ajs:Ajs_2072 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.917
AEB84962.1
SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: dia:Dtpsy_1763 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase.
  
 
 0.917
AEB84963.1
SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: pna:Pnap_2658 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase.
  
 
 0.915
AEB82943.1
KEGG: ajs:Ajs_3718 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal.
  
  
 
0.911
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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