Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB85508.1Hypothetical protein; KEGG: aav:Aave_2648 putative signal peptide protein. (349 aa)    
Predicted Functional Partners:
AEB85433.1
Hypothetical protein.
     
  0.900
AEB84077.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xtr:100494207 probable ABC transporter permease protein BruAb2_1124-like.
 
 
 0.840
AEB84078.1
Taurine-transporting ATPase; PFAM: ABC transporter-like; KEGG: xtr:100494366 uncharacterized ABC transporter ATP-binding protein MJ0412-like; SMART: ATPase, AAA+ type, core.
 
 
 0.831
AEB85978.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component.
  
 
 0.829
AEB85977.1
Taurine-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2681 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.799
AEB85507.1
PFAM: Protein of unknown function DUF3096; KEGG: dia:Dtpsy_1977 hypothetical protein.
 
     0.597
AEB82643.1
PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_0172 extracellular ligand-binding receptor.
  
   
 0.542
AEB86188.1
KEGG: bph:Bphy_7176 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
 
  
 0.506
AEB84517.1
KEGG: ajs:Ajs_2555 putative transmembrane anti-sigma factor.
  
    0.499
AEB82649.1
KEGG: aav:Aave_0233 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
   
 
 0.485
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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