STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85513.1KEGG: ajs:Ajs_1730 hypothetical protein. (238 aa)    
Predicted Functional Partners:
AEB85512.1
KEGG: hsm:HSM_1673 hypothetical protein.
       0.796
AEB85511.1
KEGG: vap:Vapar_3801 hypothetical protein.
       0.781
AEB83108.1
TIGRFAM: Conserved hypothetical protein CHP03016, PEP-CTERM; KEGG: rfr:Rfer_0661 hypothetical protein.
  
     0.730
AEB83495.1
KEGG: rfr:Rfer_0701 hypothetical protein.
  
     0.646
AEB84031.1
KEGG: pol:Bpro_1263 hypothetical protein.
  
     0.643
AEB82961.1
KEGG: dia:Dtpsy_0494 endoproteinase Arg-C.
  
     0.534
AEB85571.1
KEGG: ajs:Ajs_2034 hypothetical protein.
  
     0.529
AEB84956.1
SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: ajs:Ajs_2852 SufBD protein.
  
     0.525
AEB83138.1
KEGG: rfr:Rfer_0705 tetratricopeptide TPR_2; TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein, putative; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; Tetratricopeptide TPR-1.
  
     0.520
AEB85514.1
KEGG: vap:Vapar_3798 hypothetical protein.
       0.508
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.