Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB85570.1KEGG: ajs:Ajs_2035 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter. (406 aa)    
Predicted Functional Partners:
AEB85194.1
PFAM: Chromate transporter; KEGG: dia:Dtpsy_1615 chromate transporter.
  
     0.743
AEB85571.1
KEGG: ajs:Ajs_2034 hypothetical protein.
       0.615
AEB85569.1
PFAM: Auxin efflux carrier; KEGG: dia:Dtpsy_1882 auxin efflux carrier.
       0.493
AEB85195.1
PFAM: Chromate transporter; KEGG: dia:Dtpsy_1614 chromate transporter.
 
     0.461
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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