STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85572.1PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dia:Dtpsy_1842 TonB-dependent receptor. (683 aa)    
Predicted Functional Partners:
AEB85184.1
KEGG: dia:Dtpsy_1442 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
 
 
 0.767
AEB83760.1
KEGG: dia:Dtpsy_1044 hypothetical protein.
  
 
 0.704
AEB84619.1
Protein TolA; KEGG: dia:Dtpsy_2263 protein TolA; TIGRFAM: Tol-Pal system, TolA; TonB, C-terminal; PFAM: Tol-Pal system, TolA.
  
 
 0.704
AEB85369.1
KEGG: ajs:Ajs_1826 hypothetical protein.
  
 
 0.704
AEB86141.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: ajs:Ajs_3655 TonB family protein.
  
 
 0.704
AEB86824.1
KEGG: ctt:CtCNB1_3496 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel.
 
  
 0.689
AEB83250.1
PFAM: Spherulation-specific family 4; KEGG: ajs:Ajs_0766 hypothetical protein.
   
 
 0.687
AEB86440.1
KEGG: dia:Dtpsy_3022 hypothetical protein.
   
 
 0.687
AEB85980.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dia:Dtpsy_2688 TonB-dependent receptor.
  
   
 0.556
AEB82997.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor.
 
  
 0.554
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.