Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB85580.1Protein of unknown function DUF6 transmembrane; KEGG: axy:AXYL_03456 hypothetical protein; manually curated; PFAM: Drug/metabolite transporter. (285 aa)    
Predicted Functional Partners:
AEB84466.1
KEGG: ajs:Ajs_1629 hypothetical protein.
 
     0.501
AEB82682.1
PFAM: Domain of unknown function DUF1228; KEGG: dia:Dtpsy_0209 protein of unknown function DUF1228.
 
  
 0.460
AEB85581.1
PFAM: Flavodoxin/nitric oxide synthase; KEGG: dia:Dtpsy_2016 NAD(P)H dehydrogenase (quinone).
       0.426
AEB85582.1
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; KEGG: dia:Dtpsy_2017 acyl-CoA dehydrogenase domain protein.
   
   0.426
AEB83641.1
KEGG: dac:Daci_3482 hypothetical protein.
  
     0.417
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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