Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
selOUPF0061 protein ydiU; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (495 aa)    
Predicted Functional Partners:
AEB85595.1
TIGRFAM: Methionine sulphoxide reductase B; KEGG: dia:Dtpsy_2028 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
     
 0.864
AEB85596.1
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
       0.815
AEB85597.1
PFAM: BolA protein; KEGG: dia:Dtpsy_2030 BolA family protein; Belongs to the BolA/IbaG family.
       0.815
AEB85598.1
PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dia:Dtpsy_2031 PpiC-type peptidyl-prolyl cis-trans isomerase.
 
 
   0.725
AEB85593.1
KEGG: dia:Dtpsy_2026 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase.
       0.543
AEB85590.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2023 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.400
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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