STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85627.1KEGG: ajs:Ajs_1598 nucleoid protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS. (117 aa)    
Predicted Functional Partners:
AEB86160.1
KEGG: dia:Dtpsy_2944 histone protein.
  
     0.613
AEB87006.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.584
AEB85628.1
Hypothetical protein.
       0.547
AEB85629.1
PRTRC system ThiF family protein; KEGG: ajs:Ajs_1597 UBA/ThiF-type NAD/FAD binding protein; TIGRFAM: ParB-related, ThiF-related cassette, ThiF; PFAM: UBA/THIF-type NAD/FAD binding fold.
       0.547
AEB84508.1
PFAM: Thioredoxin domain; KEGG: dia:Dtpsy_1244 hypothetical protein.
  
     0.538
AEB85601.1
KEGG: ajs:Ajs_2473 hypothetical protein.
  
     0.531
AEB84203.1
PFAM: LysR, substrate-binding; KEGG: mpt:Mpe_A2407 transcriptional regulator.
  
   
 0.502
AEB85183.1
KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein; manually curated; PFAM: BFD-like [2Fe-2S]-binding domain.
  
     0.488
AEB83427.1
KEGG: dac:Daci_1840 putative lipoprotein.
  
    0.462
AEB85630.1
KEGG: ajs:Ajs_1596 hypothetical protein; TIGRFAM: ParB-related, ThiF-related cassette, protein A; PFAM: Domain of unknown function DUF2016.
       0.449
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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