close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85640.1KEGG: ajs:Ajs_1584 putative EA59 gene protein, phage lambda. (540 aa)    
Predicted Functional Partners:
AEB85639.1
KEGG: ajs:Ajs_1585 putative EA31 gene protein, phage lambda.
 
   
 0.957
AEB84425.1
KEGG: mca:MCA0277 hypothetical protein.
  
  
 0.769
AEB84424.1
KEGG: xfm:Xfasm12_2267 type I restriction-modification system endonuclease; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal.
  
    0.761
AEB85641.1
Hypothetical protein; Manually curated; KEGG: dia:Dtpsy_2166 hypothetical protein.
       0.510
AEB85642.1
KEGG: rfr:Rfer_1072 hypothetical protein.
       0.510
AEB85643.1
Gp37Gp68 family protein; PFAM: Phage Gp37Gp68; KEGG: dia:Dtpsy_2170 Gp37Gp68 family protein.
       0.443
AEB84191.1
KEGG: app:CAP2UW1_2946 N-6 DNA methylase.
  
  
 0.419
AEB84426.1
PFAM: DNA methylase, adenine-specific; KEGG: xfn:XfasM23_2177 N-6 DNA methylase.
  
  
 0.419
AEB85127.1
PFAM: DNA methylase, adenine-specific; KEGG: hch:HCH_07036 type I restriction-modification system methyltransferase subunit.
  
  
 0.419
AEB85193.1
PFAM: Small multidrug resistance protein; KEGG: dia:Dtpsy_1617 small multidrug resistance protein.
  
    0.414
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.