STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85642.1KEGG: rfr:Rfer_1072 hypothetical protein. (427 aa)    
Predicted Functional Partners:
AEB85643.1
Gp37Gp68 family protein; PFAM: Phage Gp37Gp68; KEGG: dia:Dtpsy_2170 Gp37Gp68 family protein.
 
     0.854
AEB85641.1
Hypothetical protein; Manually curated; KEGG: dia:Dtpsy_2166 hypothetical protein.
       0.773
AEB87012.1
KEGG: dia:Dtpsy_3473 hypothetical protein.
  
     0.522
AEB85640.1
KEGG: ajs:Ajs_1584 putative EA59 gene protein, phage lambda.
       0.510
AEB85639.1
KEGG: ajs:Ajs_1585 putative EA31 gene protein, phage lambda.
       0.495
AEB87014.1
SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: dia:Dtpsy_3475 SMC domain protein.
 
     0.449
AEB85644.1
PFAM: Protein of unknown function DUF1814; KEGG: dia:Dtpsy_2171 hypothetical protein.
       0.445
AEB85645.1
KEGG: vei:Veis_2691 hypothetical protein.
       0.445
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.