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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85650.1SMART: DEAD-like helicase, N-terminal; KEGG: ajs:Ajs_1578 helicase domain-containing protein. (1680 aa)    
Predicted Functional Partners:
AEB83192.1
Cytidyltransferase-related domain protein; KEGG: ajs:Ajs_0701 cytidyltransferase-like protein; TIGRFAM: Cytidyltransferase-related; PFAM: NUDIX hydrolase domain; Cytidylyltransferase.
   
    0.729
cobB-2
NAD-dependent deacetylase; KEGG: dia:Dtpsy_1612 silent information regulator protein Sir2; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; Belongs to the sirtuin family. Class III subfamily.
  
    0.662
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.618
AEB86210.1
UPF0301 protein yqgE; Manually curated; HAMAP: Protein of unknown function DUF179; KEGG: dia:Dtpsy_2896 protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; Belongs to the UPF0301 (AlgH) family.
   
    0.612
AEB85200.1
KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase.
   
    0.489
AEB82850.1
KEGG: pol:Bpro_2969 hypothetical protein.
  
     0.413
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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