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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85727.1PFAM: Methyltransferase type 11; KEGG: dia:Dtpsy_2205 methyltransferase type 11. (190 aa)    
Predicted Functional Partners:
AEB85726.1
Rhodanese-like protein; KEGG: dia:Dtpsy_2204 transcriptional regulator, ArsR family; PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; Rhodanese-like.
     
 0.793
AEB85728.1
DsrE family protein; PFAM: Sulphur relay, DsrE/F-like protein; KEGG: dia:Dtpsy_2206 DsrE family protein.
       0.701
AEB85729.1
KEGG: dia:Dtpsy_2207 methyltransferase type 11; manually curated; PFAM: Methyltransferase type 11.
       0.627
AEB83715.1
PFAM: Cytochrome P450; KEGG: ajs:Ajs_3226 cytochrome P450.
   
 
 0.446
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.433
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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