STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85747.1ArsC family protein; KEGG: dia:Dtpsy_2230 arsenate reductase and related; TIGRFAM: Transcriptional regulator Spx/MgsR; PFAM: Arsenate reductase-like; Belongs to the ArsC family. (128 aa)    
Predicted Functional Partners:
AEB85746.1
FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; KEGG: ajs:Ajs_2739 FolC bifunctional protein; PFAM: Mur ligase, central; Mur ligase, C-terminal; Belongs to the folylpolyglutamate synthase family.
       0.700
AEB85744.1
PFAM: Colicin V production, CvpA; Protein of unknown function DUF2474; KEGG: dia:Dtpsy_2227 colicin V production protein.
     
 0.614
AEB85745.1
Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_2228 sporulation domain protein.
       0.581
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
 
     0.528
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.527
AEB85748.1
KEGG: dia:Dtpsy_2231 17 kDa surface antigen.
       0.517
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.476
AEB83522.1
PFAM: UspA; KEGG: dia:Dtpsy_0997 UspA domain protein.
   
  
 0.428
AEB84735.1
PFAM: UspA; KEGG: dia:Dtpsy_1732 UspA domain protein.
   
  
 0.428
AEB82640.1
PFAM: Ribonuclease BN-related; KEGG: ajs:Ajs_0151 ribonuclease BN.
  
  
 0.427
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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