STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85780.1KEGG: ava:Ava_3094 virulence-associated E. (183 aa)    
Predicted Functional Partners:
AEB85779.1
SMART: Primase, C-terminal 1; KEGG: aeh:Mlg_0791 ATPase-like protein.
  
    0.859
AEB85781.1
Hypothetical protein.
       0.773
AEB85782.1
KEGG: glo:Glov_1426 hypothetical protein.
       0.773
AEB85784.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: glo:Glov_1428 integrase family protein; Belongs to the 'phage' integrase family.
     
 0.499
AEB85783.1
Hypothetical protein.
       0.480
AEB82850.1
KEGG: pol:Bpro_2969 hypothetical protein.
  
    0.405
AEB83490.1
AAA ATPase; KEGG: pol:Bpro_0961 hypothetical protein; manually curated; SMART: ATPase, AAA+ type, core.
  
    0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.